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PrefixSum.h
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// Copyright Contributors to the OpenVDB Project
// SPDX-License-Identifier: MPL-2.0
/*!
\file PrefixSum.h
\author Ken Museth
\date March 12, 2023
\brief Multi-threaded implementations of inclusive prefix sum
\note An exclusive prefix sum is simply an array starting with zero
followed by the elements in the inclusive prefix sum, minus its
last entry which is the sum of all the input elements.
*/
#ifndef NANOVDB_PREFIX_SUM_H_HAS_BEEN_INCLUDED
#define NANOVDB_PREFIX_SUM_H_HAS_BEEN_INCLUDED
#include "Range.h"// for Range1D
#include <vector>
#include <functional>// for std::plus
#ifdef NANOVDB_USE_TBB
#include <tbb/parallel_scan.h>
#endif
namespace nanovdb {
/// @brief Computes inclusive prefix sum of a vector
/// @tparam T Type of the elements in the input/out vector
/// @tparam OpT Type of operation performed on each element (defaults to sum)
/// @param vec input and output vector
/// @param threaded if true multi-threading is used
/// @note Inclusive prefix sum: for (i=1; i<N; ++i) vec[i] += vec[i-1]
/// @return sum of all input elements, which is also the last element of the inclusive prefix sum
template<typename T, typename OpT = std::plus<T>>
T prefixSum(std::vector<T> &vec, bool threaded = true, OpT op = OpT());
/// @brief An inclusive scan includes in[i] when computing out[i]
/// @note Inclusive prefix operation: for (i=1; i<N; ++i) vec[i] = Op(vec[i],vec[i-1])
template<typename T, typename Op>
void inclusiveScan(T *array, size_t size, const T &identity, bool threaded, Op op)
{
#ifndef NANOVDB_USE_TBB
threaded = false;
(void)identity;// avoids compiler warning
#endif
if (threaded) {
#ifdef NANOVDB_USE_TBB
using RangeT = tbb::blocked_range<size_t>;
tbb::parallel_scan(RangeT(0, size), identity,
[&](const RangeT &r, T sum, bool is_final_scan)->T {
T tmp = sum;
for (size_t i = r.begin(); i < r.end(); ++i) {
tmp = op(tmp, array[i]);
if (is_final_scan) array[i] = tmp;
}
return tmp;
},[&](const T &a, const T &b) {return op(a, b);}
);
#endif
} else { // serial inclusive prefix operation
for (size_t i=1; i<size; ++i) array[i] = op(array[i], array[i-1]);
}
}// inclusiveScan
template<typename T, typename OpT>
T prefixSum(std::vector<T> &vec, bool threaded, OpT op)
{
inclusiveScan(vec.data(), vec.size(), T(0), threaded, op);
return vec.back();// sum of all input elements
}// prefixSum
}// namespace nanovdb
#endif // NANOVDB_PREFIX_SUM_H_HAS_BEEN_INCLUDED
Range.h
Custom Range class that is compatible with the tbb::blocked_range classes.
nanovdb
Convert a base-pointer to an openvdb grid, denoted srcGrid, to a nanovdb grid of the same type,...
Definition NanoVDB.h:247
nanovdb::prefixSum
T prefixSum(std::vector< T > &vec, bool threaded=true, OpT op=OpT())
Computes inclusive prefix sum of a vector.
Definition PrefixSum.h:71
nanovdb::inclusiveScan
void inclusiveScan(T *array, size_t size, const T &identity, bool threaded, Op op)
An inclusive scan includes in[i] when computing out[i].
Definition PrefixSum.h:44